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How to identify highly mutated aminoacid from clustalw?

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By Calculating the distance score between two nodes(Taxon)
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Top Bio Informatics Questions

☺	What is the main idea of maximum parsimony in phylogenetic tree construction? What are the drawbacks?

☺	What are the main approaches of predicting protein interactions using genomic context analysis?

☺	How you calculate sensitivity and selectivity of Blast?

☺	Suppose you used the NCBI Blast server to look for a match to a fruit-fly gene. Suppose further that the best alignment contained this section of an alignment: Hit from database: XXXXXXXXXXXXXXNFSTSQ user sequence: SLEAEAAPASISPSNFSSSQ What do the Xs signify?

☺	Which of the following sequences contains the pattern [AG]-x (4)-G-K-[ST] from the PROSITE database? seq. A: VAGWGKST seq B: GVLKRGKS seq. C: AGVLKGRT seq. D: AGVGKSTP?

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